CPNE5

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CPNE5 RNA expression is significantly associated with the protein abundance of many other proteins, with 19,839 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CPNE5-associated proteins across cancer lineages are SEPTIN1, WAS, and WIPF1. Each is linked with CPNE5 in more than 7 cancer types. Because this analysis shows association rather than direction, both CPNE5-to-partner and partner-to-CPNE5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CPNE5 versus SEPTIN1 in LSCC, with a Pearson correlation of 0.78.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CPNE5→partner) and Y-score (partner→CPNE5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSEPTIN1 →+0.842+0.949<.001<.00138
LSCCWAS →+0.454+0.972<.001<.00138
UCECWIPF1 →+0.547+0.942<.001<.00138
OVLIMD2 →+0.805+0.611<.001<.00138
UCECMZB1 →+1.245+0.809<.001<.00138
LSCCARHGAP45 →+0.521+0.994<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,839 associations by consensus.

CPNE5 vs SEPTIN1 — LSCC

Per-sample scatter of CPNE5 vs SEPTIN1 in LSCC (Pearson r = 0.78).

Explore this scatter interactively →

Exploration