Across TCGA patient cohorts, CPNE1 protein abundance is significantly associated with the RNA expression of many other genes, with 5,671 significant associations in total. COAD shows the largest number of these associations.

The most reproducible CPNE1-associated genes across cancer lineages are PIGU, RBM39, and CTNNBL1. Each is linked with CPNE1 in more than 4 cancer types. Because this analysis shows association rather than direction, both CPNE1-to-partner and partner-to-CPNE1 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CPNE1→partner) and Y-score (partner→CPNE1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	PIGU →	+0.390	+0.375	<.001	.001	3	4
COAD	RBM39 →	+0.496	+0.510	<.001	<.001	3	4
OV	CTNNBL1 →	+0.501	+0.617	.003	.008	2	5
COAD	COMMD7 →	+0.421	+0.394	<.001	<.001	3	4
COAD	PHF20 →	+0.452	+0.504	<.001	<.001	3	4
COAD	NFS1 →	+0.536	+0.559	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,671 associations by consensus.

Exploration

CPNE1 survival (RNA) · tumor vs normal (RNA) · all CPNE1 data types