CPB2-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, CPB2-AS1 RNA differs between tumor and matched normal tissue in 10 of 18 cancer types tested, making tumor–normal expression one of CPB2-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney chromophobe (KICH), where CPB2-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types CPB2-AS1 is over-expressed in tumor, although a few such as KICH and KIRC show the opposite, repressed pattern.

KICH, KIRC, and LUSC are the cancer types where CPB2-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in CPB2-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KICHMaleIV−0.280<.00110view →
KIRCFemaleII,III,IV−0.193<.00110view →
LUSCAllII,III,IV−0.165<.0018view →
THCAFemaleAll−0.207<.0017view →
KIRPMaleIII,IV−0.188<.0016view →
LUADFemaleII,III,IV−0.195<.0015view →
BRCAAllAll−0.107.0024view →
LIHCMaleAll+0.196.0123view →
BLCAFemaleIV−0.066.0073view →
CHOLFemaleAll−0.503.0262view →
BRCAAllIV+0.245.0332view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 11 strongest of 10 lineages.

CPB2-AS1–KICH

Tumor-vs-normal expression box plot for CPB2-AS1 RNA in KICH.

Open the KICH breakdown →

Exploration