COPZ2

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, COPZ2 mutation is significantly associated with the immune_cell of many other genes, with 1 significant associations in total. LUSC shows the largest number of these associations.

The most reproducible COPZ2-associated genes across cancer lineages are GMP. Each is linked with COPZ2 in more than 1 cancer types. Because this analysis shows association rather than direction, both COPZ2-to-partner and partner-to-COPZ2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GMP grouped by COPZ2-low versus COPZ2-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (COPZ2→partner) and Y-score (partner→COPZ2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCGMP →+0.157+4.264<.001.02431
Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

GMP by COPZ2 expression — LUSC

Box plot of GMP in COPZ2-low vs COPZ2-high samples in LUSC.

Explore this box plot interactively →

Exploration