COPS9

Across TCGA cell cohorts, COPS9 RNA expression is significantly associated with the RNA expression of many other genes, with 8,569 significant associations in total. BONE shows the largest number of these associations.

The most reproducible COPS9-associated genes across cancer lineages are NDUFB3, COPS8, and SNRPG. Each is linked with COPS9 in more than 16 cancer types. Because this analysis shows association rather than direction, both COPS9-to-partner and partner-to-COPS9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, COPS9 versus NDUFB3 in UPPER_AERODIGESTIVE_TRACT, with a Pearson correlation of 0.62.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (COPS9→partner) and Y-score (partner→COPS9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UPPER_AERODIGESTIVE_TRACT	NDUFB3 →	+0.807	+1.166	.001	<.001	3	17
BREAST	COPS8 →	+1.364	+1.260	<.001	.001	3	16
OESOPHAGUS	SNRPG →	+1.098	+1.222	<.001	<.001	3	16
PANCREAS	ATP5MD →	+1.075	+0.896	<.001	<.001	3	15
LARGE_INTESTINE	OST4 →	+0.950	+0.997	<.001	<.001	3	14
UPPER_AERODIGESTIVE_TRACT	TMA7 →	+1.392	+1.205	<.001	<.001	3	14

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,569 associations by consensus.

COPS9 vs NDUFB3 — UPPER_AERODIGESTIVE_TRACT

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