COPRS

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, COPRS protein abundance is significantly associated with the RNA expression of many other genes, with 10,074 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible COPRS-associated genes across cancer lineages are CPD, PSMD11, and IFT22. Each is linked with COPRS in more than 3 cancer types. Because this analysis shows association rather than direction, both COPRS-to-partner and partner-to-COPRS results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, COPRS versus CPD in LUAD, with a Pearson correlation of 0.32.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (COPRS→partner) and Y-score (partner→COPRS) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADCPD →+0.515+0.201.002<.00134
LSCCPSMD11 →+0.497+0.246<.001<.00134
LSCCIFT22 →+0.646+0.260<.001.00234
LSCCTUBG1 →+0.657+0.248<.001<.00134
BRCANT5C3B →+0.590+0.289<.001<.00134
UCECBBIP1 →-0.491-0.202.001.00434
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,074 associations by consensus.

COPRS vs CPD — LUAD

Per-sample scatter of COPRS vs CPD in LUAD (Pearson r = 0.32).

Explore this scatter interactively →

Exploration