COLQ

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, COLQ mutation is significantly associated with the RNA expression of many other genes, with 10 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible COLQ-associated genes across cancer lineages are SPATA19, LCE1E, and TMEM72. Each is linked with COLQ in more than 1 cancer types. Because this analysis shows association rather than direction, both COLQ-to-partner and partner-to-COLQ results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (COLQ→partner) and Y-score (partner→COLQ) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaSPATA19 →+0.011+3.984<.001.00631
BLOOD_LeukemiaLCE1E →+0.343+2.774.003.00631
BLOOD_LeukemiaTMEM72 →+1.035+3.295<.001.00931
BLOOD_LeukemiaTMEM244 →+0.203+2.966.001.00531
BLOOD_LeukemiaSLC5A8 →+0.069+3.464<.001.00331
BLOOD_LeukemiaDAZL →+0.126+4.493<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

Exploration