Across TCGA cell cohorts, COLGALT2 mutation is significantly associated with the RNA expression of many other genes, with 20 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible COLGALT2-associated genes across cancer lineages are OR6Q1, KLHL40, and OR2T3. Each is linked with COLGALT2 in more than 1 cancer types. Because this analysis shows association rather than direction, both COLGALT2-to-partner and partner-to-COLGALT2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (COLGALT2→partner) and Y-score (partner→COLGALT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	OR6Q1 →	+0.022	+5.022	<.001	.002	3	1
SKIN	KLHL40 →	+0.007	+4.688	<.001	<.001	3	1
SKIN	OR2T3 →	+0.010	+4.437	<.001	.004	3	1
BLOOD_Lymphoma	REG3G →	+0.026	+4.867	.004	.009	3	1
BLOOD_Lymphoma	TEX55 →	+0.055	+5.209	<.001	.005	3	1
BLOOD_Lymphoma	CST9 →	+0.060	+5.209	<.001	.005	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 20 associations by consensus.

Exploration

COLGALT2 survival (RNA) · tumor vs normal (RNA) · all COLGALT2 data types