COL9A3

Across TCGA patient cohorts, COL9A3 protein abundance is significantly associated with the RNA expression of many other genes, with 10,508 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible COL9A3-associated genes across cancer lineages are VGLL1, TRAPPC13, and C10orf99. Each is linked with COL9A3 in more than 1 cancer types. Because this analysis shows association rather than direction, both COL9A3-to-partner and partner-to-COL9A3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, COL9A3 versus VGLL1 in BRCA, with a Pearson correlation of 0.61.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (COL9A3→partner) and Y-score (partner→COL9A3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	VGLL1 →	+3.104	+1.368	.009	.006	3	2
OV	TRAPPC13 →	-0.810	-0.895	.002	.002	3	2
LSCC	C10orf99 →	-2.226	-0.920	.009	.001	3	2
BRCA	RTKN →	+0.812	+1.127	.005	.003	3	2
BRCA	CDK18 →	+1.574	+1.129	.005	.005	3	2
BRCA	IL22RA1 →	+1.122	+1.181	.001	.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,508 associations by consensus.

COL9A3 vs VGLL1 — BRCA

Explore this scatter interactively →