COL6A2

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, COL6A2 mass-spec protein differs between tumor and matched normal tissue in 7 of 18 cancer types tested, making tumor–normal expression one of COL6A2’s most consistent transcriptional readouts.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where COL6A2 mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types COL6A2 is over-expressed in tumor, although a few such as COAD and LUAD show the opposite, repressed pattern.

CCRCC, COAD, and LUAD are the cancer types where COL6A2 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in COL6A2 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
CCRCCAllIV+0.629<.00112view →
COADMaleIII,IV−1.444<.00111view →
LUADFemaleII,III,IV−0.842<.0019view →
LSCCMaleII,III,IV−0.908<.0018view →
HNSCAllII,III,IV−0.340<.0016view →
PDACFemaleAll+0.360.0044view →
OVAllAll−1.098.0032view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 7 strongest of 7 lineages.

COL6A2–CCRCC

Tumor-vs-normal mass-spec protein box plot for COL6A2 in CCRCC.

Open the CCRCC breakdown →

Exploration