COL28A1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, COL28A1 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,235 significant associations in total. GBM shows the largest number of these associations.

The most reproducible COL28A1-associated proteins across cancer lineages are MIOS, RNF213, and BROX. Each is linked with COL28A1 in more than 4 cancer types. Because this analysis shows association rather than direction, both COL28A1-to-partner and partner-to-COL28A1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (COL28A1→partner) and Y-score (partner→COL28A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIOS →+0.196+0.988<.001<.00135
UCECRNF213 →-0.426-0.961<.001<.00134
HNSCBROX →+0.356+0.956<.001.00234
HNSCHID1_S593 →+1.136+1.467.001.00234
UCECMISP3_S91 →+0.831+1.055<.001<.00134
BRCAMYO5C →+0.596+1.059<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,235 associations by consensus.

Exploration