COL21A1

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, COL21A1 mass-spec protein is linked to patient survival in 6 of 34 cancer types, making it a survival-associated COL21A1 data layer compared with 22 for mass-spec protein and 8 for mutation status.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where higher COL21A1 mass-spec protein is associated with better overall survival. In most high-consensus cancer types, elevated COL21A1 expression acts as an unfavorable survival marker, although some lineages such as CCRCC and PDAC show a favorable association.

CCRCC, LUAD, and PDAC are the cancer types where COL21A1 mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
CCRCCOSTertileAll0.9570.665.00246view →
LUADDFSMedianII,III,IV0.6600.994<.00114view →
PDACOSMedianAll1.0000.888.0107view →
GBMDFSMedianAll0.2470.518.0236view →
UCECOSMedianIII,IV0.3551.000.0134view →
LSCCOSMedianII,III,IV0.8840.701.0362view →
Pink = unfavorable, green = favorable. Showing the 6 strongest of 6 lineages.

COL21A1–CCRCC (OS)

Kaplan–Meier survival curve for COL21A1 mass-spec protein-high vs -low samples in CCRCC.

Open the CCRCC breakdown →

Exploration