COL15A1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, COL15A1 mutation is significantly associated with the RNA expression of many other genes, with 7,151 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible COL15A1-associated genes across cancer lineages are RNF126, ASIC3, and R3HDM4. Each is linked with COL15A1 in more than 4 cancer types. Because this analysis shows association rather than direction, both COL15A1-to-partner and partner-to-COL15A1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (COL15A1→partner) and Y-score (partner→COL15A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNF126 →+0.561+2.555<.001<.00135
LUSCASIC3 →+0.480+3.712.001<.00134
CESCR3HDM4 →+0.435+3.489.004.00233
READMIR342 →+0.529+4.827<.001.00233
LUADANKRD13B →+0.605+2.415.005.00333
UCECHIRIP3 →+0.449+1.667<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,151 associations by consensus.

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