COG2

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, COG2 mass-spec protein differs between tumor and matched normal tissue in 5 of 18 cancer types tested, making tumor–normal expression one of COG2’s most consistent transcriptional readouts.

The strongest signal is observed in lung adenocarcinoma (LUAD), where COG2 mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types COG2 is over-expressed in tumor, although a few such as PDAC show the opposite, repressed pattern.

LUAD, CCRCC, and COAD are the cancer types where COG2 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in COG2 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LUADFemaleII,III,IV+0.546<.0019view →
CCRCCMaleIII,IV+0.180<.0019view →
COADAllAll+0.146<.0018view →
LSCCMaleAll+0.185<.0017view →
PDACFemaleAll−0.337<.0016view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 5 strongest of 5 lineages.

COG2–LUAD

Tumor-vs-normal mass-spec protein box plot for COG2 in LUAD.

Open the LUAD breakdown →

Exploration