CNTNAP4

Across TCGA patient cohorts, CNTNAP4 protein abundance is significantly associated with the RNA expression of many other genes, with 637 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CNTNAP4-associated genes across cancer lineages are NEFH, CBX7, and CACNA1I. Each is linked with CNTNAP4 in more than 1 cancer types. Because this analysis shows association rather than direction, both CNTNAP4-to-partner and partner-to-CNTNAP4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CNTNAP4 versus NEFH in GBM, with a Pearson correlation of 0.34.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CNTNAP4→partner) and Y-score (partner→CNTNAP4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	NEFH →	+0.947	+0.743	.003	<.001	3	1
GBM	CBX7 →	+0.654	+0.611	.001	.002	3	1
GBM	CACNA1I →	+0.523	+0.626	.002	.002	3	1
GBM	KIAA0930 →	+0.604	+0.664	<.001	<.001	3	1
GBM	PSMC1 →	-0.332	-0.770	<.001	.002	3	1
GBM	PPP4R3A →	-0.337	-0.759	.002	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 637 associations by consensus.

CNTNAP4 vs NEFH — GBM

Explore this scatter interactively →