CNTNAP3B

Across TCGA patient cohorts, CNTNAP3B RNA expression is significantly associated with the RNA expression of many other genes, with 15,450 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible CNTNAP3B-associated genes across cancer lineages are CNTNAP3P2, CNTNAP3, and ZNF658. Each is linked with CNTNAP3B in more than 31 cancer types. Because this analysis shows association rather than direction, both CNTNAP3B-to-partner and partner-to-CNTNAP3B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CNTNAP3B versus CNTNAP3P2 in ESCA, with a Pearson correlation of 0.88.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CNTNAP3B→partner) and Y-score (partner→CNTNAP3B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	CNTNAP3P2 →	+0.873	+0.679	<.001	<.001	3	32
ESCA	CNTNAP3 →	+1.220	+0.634	<.001	<.001	3	31
THYM	ZNF658 →	+0.862	+0.425	<.001	<.001	3	25
STAD	WWTR1 →	+1.078	+0.252	<.001	<.001	3	24
ACC	PCNX1 →	+0.863	+0.210	<.001	.009	3	23
THYM	NRP1 →	+1.709	+0.297	<.001	<.001	3	23

Each partner links to its Q-omics profile. Showing the 6 strongest of 15,450 associations by consensus.

CNTNAP3B vs CNTNAP3P2 — ESCA

Explore this scatter interactively →