CNTNAP3B

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CNTNAP3B RNA expression is significantly associated with the protein abundance of many other proteins, with 7,404 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CNTNAP3B-associated proteins across cancer lineages are PTPRM, NOSTRIN, and SPTBN1. Each is linked with CNTNAP3B in more than 3 cancer types. Because this analysis shows association rather than direction, both CNTNAP3B-to-partner and partner-to-CNTNAP3B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CNTNAP3B versus PTPRM in UCEC, with a Pearson correlation of 0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CNTNAP3B→partner) and Y-score (partner→CNTNAP3B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPTPRM →+0.416+0.571<.001<.00134
LUADNOSTRIN →+0.365+0.214<.001.00233
UCECSPTBN1 →+0.259+0.504<.001.00433
BRCAIFI16 →+0.411+0.354.009.00133
LSCCANXA2_Y318 →+0.711+0.657<.001<.00133
CCRCCCDH13 →+0.353+0.370.003.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,404 associations by consensus.

CNTNAP3B vs PTPRM — UCEC

Per-sample scatter of CNTNAP3B vs PTPRM in UCEC (Pearson r = 0.41).

Explore this scatter interactively →

Exploration