CNRIP1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CNRIP1 mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible CNRIP1-associated genes across cancer lineages are OR52E1 and DEFA4. Each is linked with CNRIP1 in more than 1 cancer types. Because this analysis shows association rather than direction, both CNRIP1-to-partner and partner-to-CNRIP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR52E1 grouped by CNRIP1-low versus CNRIP1-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CNRIP1→partner) and Y-score (partner→CNRIP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINOR52E1 →+0.109+5.415<.001.00431
LARGE_INTESTINEDEFA4 →+0.026+4.022<.001.00631
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

OR52E1 by CNRIP1 expression — SKIN

Box plot of OR52E1 in CNRIP1-low vs CNRIP1-high samples in SKIN.

Explore this box plot interactively →

Exploration