CNOT6

Across TCGA patient cohorts, CNOT6 mutation is significantly associated with the total protein of many other genes, with 36 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CNOT6-associated genes across cancer lineages are TFRC, ASNS, and C-Raf. Each is linked with CNOT6 in more than 1 cancer types. Because this analysis shows association rather than direction, both CNOT6-to-partner and partner-to-CNOT6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TFRC grouped by CNOT6-low versus CNOT6-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CNOT6→partner) and Y-score (partner→CNOT6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	TFRC →	+0.559	+2.700	.002	.005	3	2
UCEC	ASNS →	+0.363	+2.415	.003	.003	3	2
UCEC	C-Raf →	+0.154	+1.807	.001	.025	3	2
UCEC	EGFR_pY1068 →	-0.292	-2.807	<.001	.003	3	1
UCEC	eIF4E →	+0.161	+2.321	.027	.005	3	1
UCEC	A-Raf_pS299 →	-0.146	-3.087	<.001	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 36 associations by consensus.

TFRC by CNOT6 expression — UCEC

Explore this box plot interactively →