CNOT10

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CNOT10 protein abundance is significantly associated with the RNA expression of many other genes, with 9,769 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CNOT10-associated genes across cancer lineages are FOLR2, EZH2, and GINS2. Each is linked with CNOT10 in more than 5 cancer types. Because this analysis shows association rather than direction, both CNOT10-to-partner and partner-to-CNOT10 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CNOT10 versus FOLR2 in GBM, with a Pearson correlation of -0.34.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CNOT10→partner) and Y-score (partner→CNOT10) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMFOLR2 →-1.169-0.178.001.00136
GBMEZH2 →+0.861+0.176<.001<.00135
LUADGINS2 →+1.077+0.140<.001<.00135
GBMVSIG4 →-1.457-0.193<.001<.00135
HNSCH2BC5 →+1.054+0.144.007.00135
GBMKIF15 →+1.215+0.214<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,769 associations by consensus.

CNOT10 vs FOLR2 — GBM

Per-sample scatter of CNOT10 vs FOLR2 in GBM (Pearson r = -0.34).

Explore this scatter interactively →

Exploration