CNGA4

Across TCGA patient cohorts, CNGA4 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,141 significant associations in total. STAD shows the largest number of these associations.

The most reproducible CNGA4-associated GO terms across cancer lineages are Establishment of protein localization to vacuole, Protein localization to vacuole, and Autophagosome maturation. Each is linked with CNGA4 in more than 30 cancer types. Because this analysis shows association rather than direction, both CNGA4-to-partner and partner-to-CNGA4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Establishment of protein localization to vacuole grouped by CNGA4-low versus CNGA4-high in THYM.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CNGA4→partner) and Y-score (partner→CNGA4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
THYM	Establishment of protein localization to vacuole →	+0.057	+0.271	<.001	<.001	3	31
THYM	Protein localization to vacuole →	+0.055	+0.287	<.001	<.001	3	29
ESCA	Autophagosome maturation →	+0.051	+0.145	.001	.001	2	29
STAD	Phospholipid biosynthetic process →	+0.041	+0.119	<.001	<.001	3	28
ESCA	Vesicle localization →	+0.044	+0.166	.001	<.001	3	28
TGCT	Transport along microtubule →	+0.045	+0.773	<.001	<.001	3	28

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,141 associations by consensus.

Establishment of protein localization to vacuole by CNGA4 expression — THYM

Explore this box plot interactively →