Across TCGA patient cohorts, CMTM4 mutation is significantly associated with the RNA expression of many other genes, with 800 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CMTM4-associated genes across cancer lineages are RNA5SP138, RNU6-1077P, and TDGF1P4. Each is linked with CMTM4 in more than 1 cancer types. Because this analysis shows association rather than direction, both CMTM4-to-partner and partner-to-CMTM4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CMTM4→partner) and Y-score (partner→CMTM4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BLCA	RNA5SP138 →	+0.274	+7.640	<.001	.009	3	2
UCEC	RNU6-1077P →	+0.325	+2.281	.003	.001	3	2
COAD	TDGF1P4 →	+0.112	+4.693	<.001	.007	3	1
COAD	LINC02857 →	+0.319	+4.295	<.001	.008	3	1
COAD	LINC00407 →	+0.324	+4.384	<.001	.006	3	1
COAD	RN7SL817P →	+0.155	+5.392	<.001	.002	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 800 associations by consensus.

Exploration

CMTM4 survival (RNA) · tumor vs normal (RNA) · all CMTM4 data types