CMTM3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CMTM3 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,434 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible CMTM3-associated proteins across cancer lineages are THBS2, CNN2, and DPYSL3. Each is linked with CMTM3 in more than 8 cancer types. Because this analysis shows association rather than direction, both CMTM3-to-partner and partner-to-CMTM3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CMTM3 versus THBS2 in COAD, with a Pearson correlation of 0.56.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CMTM3→partner) and Y-score (partner→CMTM3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADTHBS2 →+1.255+0.584<.001<.00139
OVCNN2 →+0.848+0.880<.001<.00139
COADDPYSL3 →+0.784+0.760<.001<.00139
OVFN1 →+1.053+0.752<.001<.00139
OVMMP2 →+0.950+0.844<.001<.00138
CCRCCMXRA5 →+1.260+0.614<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,434 associations by consensus.

CMTM3 vs THBS2 — COAD

Per-sample scatter of CMTM3 vs THBS2 in COAD (Pearson r = 0.56).

Explore this scatter interactively →

Exploration