CMPK2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CMPK2 mutation is significantly associated with the RNA expression of many other genes, with 2,540 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CMPK2-associated genes across cancer lineages are CCDC15, FERMT3, and SRFBP1. Each is linked with CMPK2 in more than 1 cancer types. Because this analysis shows association rather than direction, both CMPK2-to-partner and partner-to-CMPK2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CCDC15 grouped by CMPK2-low versus CMPK2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CMPK2→partner) and Y-score (partner→CMPK2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCCDC15 →+0.371+2.716.006.00332
UCECFERMT3 →+0.647+2.502.003.00232
UCECSRFBP1 →+0.530+2.513.008.00132
UCECNCAPD3 →+0.750+2.711<.001.00332
UCECFAM168B →+0.554+2.513.003.00132
UCECOBI1 →+0.440+3.708.008<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,540 associations by consensus.

CCDC15 by CMPK2 expression — UCEC

Box plot of CCDC15 in CMPK2-low vs CMPK2-high samples in UCEC.

Explore this box plot interactively →

Exploration