CMKLR1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CMKLR1 protein abundance is significantly associated with the RNA expression of many other genes, with 5,455 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CMKLR1-associated genes across cancer lineages are VNN1, CD180, and IL15RA. Each is linked with CMKLR1 in more than 2 cancer types. Because this analysis shows association rather than direction, both CMKLR1-to-partner and partner-to-CMKLR1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CMKLR1 versus VNN1 in GBM, with a Pearson correlation of 0.70.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CMKLR1→partner) and Y-score (partner→CMKLR1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMVNN1 →+1.195+0.861.006.00633
GBMCD180 →+1.176+0.886.001.00533
GBMIL15RA →+0.700+0.639.007.00533
GBMSIT1 →+0.954+0.792.004.00433
LSCCMS4A1 →+1.211+0.583<.001<.00133
LSCCFCMR →+1.014+0.706<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,455 associations by consensus.

CMKLR1 vs VNN1 — GBM

Per-sample scatter of CMKLR1 vs VNN1 in GBM (Pearson r = 0.70).

Explore this scatter interactively →

Exploration