CLSTN3

Across TCGA cell cohorts, CLSTN3 mutation is significantly associated with the RNA expression of many other genes, with 535 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CLSTN3-associated genes across cancer lineages are FABP9, KIF2B, and OR1M1. Each is linked with CLSTN3 in more than 1 cancer types. Because this analysis shows association rather than direction, both CLSTN3-to-partner and partner-to-CLSTN3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FABP9 grouped by CLSTN3-low versus CLSTN3-high in URINARY_TRACT.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CLSTN3→partner) and Y-score (partner→CLSTN3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
URINARY_TRACT	FABP9 →	+0.042	+4.087	<.001	.009	3	1
BLOOD_Lymphoma	KIF2B →	+0.006	+5.209	<.001	.005	3	1
BLOOD_Lymphoma	OR1M1 →	+0.019	+5.209	<.001	.005	3	1
BLOOD_Lymphoma	KRTAP4-4 →	+0.022	+5.643	<.001	.002	3	1
BLOOD_Lymphoma	OR10K1 →	+0.012	+4.867	<.001	.009	3	1
BLOOD_Lymphoma	OR9A2 →	+0.029	+5.209	<.001	.005	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 535 associations by consensus.

FABP9 by CLSTN3 expression — URINARY_TRACT

Explore this box plot interactively →