CLMN

Across TCGA patient cohorts, CLMN protein abundance is significantly associated with the RNA expression of many other genes, with 12,889 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible CLMN-associated genes across cancer lineages are LINC02292, TC2N, and TFF3. Each is linked with CLMN in more than 7 cancer types. Because this analysis shows association rather than direction, both CLMN-to-partner and partner-to-CLMN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CLMN versus LINC02292 in CCRCC, with a Pearson correlation of 0.56.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CLMN→partner) and Y-score (partner→CLMN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CCRCC	LINC02292 →	+0.333	+0.324	<.001	<.001	3	8
LUAD	TC2N →	+1.121	+0.577	<.001	<.001	3	6
BRCA	TFF3 →	+3.227	+0.471	<.001	<.001	3	6
HNSC	TMC5 →	+1.540	+0.432	<.001	<.001	3	5
HNSC	ZG16B →	+2.112	+0.374	.001	<.001	3	5
LSCC	UBXN10 →	+1.220	+0.457	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,889 associations by consensus.

CLMN vs LINC02292 — CCRCC

Explore this scatter interactively →