CLMN

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CLMN RNA expression is significantly associated with the go_rna of many other GO terms, with 4,060 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible CLMN-associated GO terms across cancer lineages are Flagellated sperm motility, Actin filament capping, and Barbed-end actin filament capping. Each is linked with CLMN in more than 8 cancer types. Because this analysis shows association rather than direction, both CLMN-to-partner and partner-to-CLMN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Flagellated sperm motility grouped by CLMN-low versus CLMN-high in URINARY_TRACT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CLMN→partner) and Y-score (partner→CLMN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
URINARY_TRACTFlagellated sperm motility →-0.088-1.114.006.00138
LIVERActin filament capping →+0.148+1.128.004.00729
UPPER_AERODIGESTIVE_TRACTBarbed-end actin filament capping →+0.130+1.089.002.00838
KIDNEYProtein targeting →+0.054+1.431.001<.00138
OESOPHAGUSNegative regulation of actin filament polymerization →+0.151+1.281.001.00438
STOMACHRegulation of actin polymerization or depolymerization →+0.078+1.824.003<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,060 associations by consensus.

Flagellated sperm motility by CLMN expression — URINARY_TRACT

Box plot of Flagellated sperm motility in CLMN-low vs CLMN-high samples in URINARY_TRACT.

Explore this box plot interactively →

Exploration