CLIC4

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, CLIC4 mass-spec protein differs between tumor and matched normal tissue in 6 of 18 cancer types tested, making tumor–normal expression one of CLIC4’s most consistent transcriptional readouts.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where CLIC4 mass-spec protein is repressed in tumor relative to normal tissue. In most cancer types CLIC4 is over-expressed in tumor, although a few such as CCRCC and LUAD show the opposite, repressed pattern.

CCRCC, LUAD, and COAD are the cancer types where CLIC4 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in CLIC4 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
CCRCCMaleAll−0.738<.00111view →
LUADFemaleIII,IV−0.628<.0019view →
COADMaleIII,IV−0.542<.0019view →
LSCCMaleIII,IV−0.649<.0018view →
HNSCAllIV+0.515<.0018view →
PDACAllAll+0.275<.0016view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 6 strongest of 6 lineages.

CLIC4–CCRCC

Tumor-vs-normal mass-spec protein box plot for CLIC4 in CCRCC.

Open the CCRCC breakdown →

Exploration