CLEC4E

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CLEC4E RNA expression is significantly associated with the protein abundance of many other proteins, with 20,025 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CLEC4E-associated proteins across cancer lineages are ARHGAP30, CYBA, and CYBB. Each is linked with CLEC4E in more than 9 cancer types. Because this analysis shows association rather than direction, both CLEC4E-to-partner and partner-to-CLEC4E results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CLEC4E versus ARHGAP30 in UCEC, with a Pearson correlation of 0.71.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CLEC4E→partner) and Y-score (partner→CLEC4E) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECARHGAP30 →+0.664+1.293<.001<.001310
UCECCYBA →+0.706+1.100<.001<.001310
UCECCYBB →+0.838+0.928<.001<.001310
PDACICAM3 →+0.576+0.943<.001<.001310
UCECPTPRC →+1.039+1.403<.001<.001310
LSCCRCSD1 →+0.629+1.104<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 20,025 associations by consensus.

CLEC4E vs ARHGAP30 — UCEC

Per-sample scatter of CLEC4E vs ARHGAP30 in UCEC (Pearson r = 0.71).

Explore this scatter interactively →

Exploration