CLEC4C

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CLEC4C mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. STOMACH shows the largest number of these associations.

The most reproducible CLEC4C-associated genes across cancer lineages are CD300H, IL22, and LRRC72. Each is linked with CLEC4C in more than 1 cancer types. Because this analysis shows association rather than direction, both CLEC4C-to-partner and partner-to-CLEC4C results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CLEC4C→partner) and Y-score (partner→CLEC4C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINECD300H →+0.045+5.415<.001.00431
STOMACHIL22 →+0.046+5.285<.001.00331
STOMACHLRRC72 →+0.093+5.285<.001.00331
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

Exploration