CLDN18

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, CLDN18 RNA differs between tumor and matched normal tissue in 11 of 18 cancer types tested, making tumor–normal expression one of CLDN18’s most consistent transcriptional readouts.

The strongest signal is observed in lung adenocarcinoma (LUAD), where CLDN18 RNA is repressed in tumor relative to normal tissue. In most cancer types CLDN18 is over-expressed in tumor, although a few such as LUAD and LUSC show the opposite, repressed pattern.

LUAD, LUSC, and HNSC are the cancer types where CLDN18 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in CLDN18 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LUADMaleIII,IV−7.576<.00111view →
LUSCFemaleII,III,IV−8.277<.0019view →
HNSCMaleIII,IV+0.656<.0018view →
KICHFemaleII,III,IV−0.548<.0018view →
BRCAAllIII,IV−0.298<.0016view →
UCECAllAll−0.170<.0016view →
LIHCAllAll+0.090<.0016view →
THCAAllAll−0.093<.0015view →
PAADFemaleAll+5.515.0304view →
COADAllAll+0.789.0054view →
CHOLFemaleAll+0.683.0041view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 11 strongest of 11 lineages.

CLDN18–LUAD

Tumor-vs-normal expression box plot for CLDN18 RNA in LUAD.

Open the LUAD breakdown →

Exploration