CLDN15

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, CLDN15 RNA differs between tumor and matched normal tissue in 11 of 18 cancer types tested, making tumor–normal expression one of CLDN15’s most consistent transcriptional readouts.

The strongest signal is observed in liver hepatocellular carcinoma (LIHC), where CLDN15 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types CLDN15 is over-expressed in tumor, although a few such as KICH and KIRC show the opposite, repressed pattern.

LIHC, HNSC, and KICH are the cancer types where CLDN15 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in CLDN15 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LIHCMaleIII,IV+2.650<.0019view →
HNSCAllIII,IV+0.605.0019view →
KICHFemaleAll−2.078<.0017view →
KIRCAllII,III,IV−0.749<.0017view →
UCECAllAll−1.009<.0016view →
BRCAAllII,III,IV−0.728<.0016view →
BLCAFemaleAll+0.657.0394view →
READMaleAll−1.180.0472view →
STADAllII,III,IV+1.310.0381view →
CHOLAllAll+0.735.0261view →
LUADAllAll−0.298.0141view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 11 strongest of 11 lineages.

CLDN15–LIHC

Tumor-vs-normal expression box plot for CLDN15 RNA in LIHC.

Open the LIHC breakdown →

Exploration