CLCNKB

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CLCNKB mutation is significantly associated with the total protein of many other genes, with 24 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CLCNKB-associated genes across cancer lineages are MEK1, mTOR_pS2448, and PCNA. Each is linked with CLCNKB in more than 1 cancer types. Because this analysis shows association rather than direction, both CLCNKB-to-partner and partner-to-CLCNKB results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CLCNKB→partner) and Y-score (partner→CLCNKB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMEK1 →+0.448+2.906.001.00132
UCECmTOR_pS2448 →-0.152-3.565.009.00232
UCECPCNA →+0.200+2.000.018.01032
UCEC4E-BP1_pT37_T46 →-0.496-3.571<.001.00232
UCECA-Raf_pS299 →-0.137-2.700.003.00631
UCECERK2 →+0.270+2.502<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 24 associations by consensus.

Exploration