CKMT2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CKMT2 protein abundance is significantly associated with the RNA expression of many other genes, with 9,497 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CKMT2-associated genes across cancer lineages are ESAM, ASPA, and S1PR1. Each is linked with CKMT2 in more than 3 cancer types. Because this analysis shows association rather than direction, both CKMT2-to-partner and partner-to-CKMT2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CKMT2 versus ESAM in UCEC, with a Pearson correlation of 0.25.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CKMT2→partner) and Y-score (partner→CKMT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECESAM →+0.656+0.533<.001<.00134
UCECASPA →+0.694+0.527<.001<.00134
BRCAS1PR1 →+0.749+0.519.005.00234
HNSCSGCA →+1.152+1.169<.001<.00134
BRCAAOC3 →+1.115+0.501<.001.00234
BRCAITGA7 →+1.344+0.598<.001.00234
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,497 associations by consensus.

CKMT2 vs ESAM — UCEC

Per-sample scatter of CKMT2 vs ESAM in UCEC (Pearson r = 0.25).

Explore this scatter interactively →

Exploration