CKMT2-AS1

Across TCGA patient cohorts, CKMT2-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 17,842 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CKMT2-AS1-associated proteins across cancer lineages are SREK1, VEZF1, and CSTA. Each is linked with CKMT2-AS1 in more than 6 cancer types. Because this analysis shows association rather than direction, both CKMT2-AS1-to-partner and partner-to-CKMT2-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CKMT2-AS1 versus SREK1 in GBM, with a Pearson correlation of 0.38.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CKMT2-AS1→partner) and Y-score (partner→CKMT2-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	SREK1 →	+0.361	+0.474	<.001	<.001	3	7
BRCA	VEZF1 →	+0.478	+0.529	<.001	<.001	3	7
LSCC	CSTA →	-1.019	-0.287	<.001	.004	3	6
GBM	ZFR →	+0.206	+0.432	<.001	<.001	3	5
BRCA	TCEAL4 →	+0.631	+0.358	<.001	<.001	3	5
BRCA	MSH3 →	+0.339	+0.488	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 17,842 associations by consensus.

CKMT2-AS1 vs SREK1 — GBM

Explore this scatter interactively →