CKAP2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CKAP2 mutation is significantly associated with the total protein of many other genes, with 34 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CKAP2-associated genes across cancer lineages are Caspase-7-cleavedD198, C-Raf, and 14-3-3_beta. Each is linked with CKAP2 in more than 2 cancer types. Because this analysis shows association rather than direction, both CKAP2-to-partner and partner-to-CKAP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by CKAP2-low versus CKAP2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CKAP2→partner) and Y-score (partner→CKAP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCaspase-7-cleavedD198 →+0.512+2.135.016.01033
UCECC-Raf →+0.140+1.700.006.04232
UCEC14-3-3_beta →-0.078-1.847.032.04931
UCECEGFR_pY1068 →-0.280-2.807.001<.00131
UCECEGFR →-0.181-2.433.001.01831
UCECeIF4E →+0.201+3.472.008.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 34 associations by consensus.

Caspase-7-cleavedD198 by CKAP2 expression — UCEC

Box plot of Caspase-7-cleavedD198 in CKAP2-low vs CKAP2-high samples in UCEC.

Explore this box plot interactively →

Exploration