CIP2A

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CIP2A mutation is significantly associated with the RNA expression of many other genes, with 14 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CIP2A-associated genes across cancer lineages are OR10H5, DEFB136, and HIGD1C. Each is linked with CIP2A in more than 1 cancer types. Because this analysis shows association rather than direction, both CIP2A-to-partner and partner-to-CIP2A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR10H5 grouped by CIP2A-low versus CIP2A-high in LUNG_NSCLC_LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CIP2A→partner) and Y-score (partner→CIP2A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADOR10H5 →+0.040+4.343<.001.00231
LUNG_NSCLC_LUADDEFB136 →+0.137+4.681<.001.00331
LUNG_NSCLC_LUADHIGD1C →+0.049+4.078<.001.00931
LUNG_NSCLC_LUADOR52B4 →+0.011+4.078<.001.00931
BLOOD_LeukemiaDIRAS2 →+0.133+4.502<.001.00131
BLOOD_LeukemiaOR10T2 →+0.623+4.691<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 14 associations by consensus.

OR10H5 by CIP2A expression — LUNG_NSCLC_LUAD

Box plot of OR10H5 in CIP2A-low vs CIP2A-high samples in LUNG_NSCLC_LUAD.

Explore this box plot interactively →

Exploration