CHST9

Across TCGA patient cohorts, CHST9 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,568 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CHST9-associated proteins across cancer lineages are HMGN5, SH3BGRL2, and BCAS1. Each is linked with CHST9 in more than 4 cancer types. Because this analysis shows association rather than direction, both CHST9-to-partner and partner-to-CHST9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CHST9 versus HMGN5 in GBM, with a Pearson correlation of 0.53.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CHST9→partner) and Y-score (partner→CHST9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	HMGN5 →	+0.942	+1.696	<.001	<.001	3	5
HNSC	SH3BGRL2 →	+0.632	+1.471	<.001	<.001	3	4
LSCC	BCAS1 →	+1.026	+1.113	<.001	<.001	3	4
HNSC	BZW1 →	-0.336	-1.022	.002	.001	3	4
HNSC	CROCC →	+0.348	+0.989	<.001	.001	3	4
CCRCC	AKAP12 →	+0.586	+1.145	<.001	.002	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,568 associations by consensus.

CHST9 vs HMGN5 — GBM

Explore this scatter interactively →