CHST9

Across TCGA patient cohorts, CHST9 protein abundance is significantly associated with the RNA expression of many other genes, with 3,772 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CHST9-associated genes across cancer lineages are TRPC1, TRIM17, and CA8. Each is linked with CHST9 in more than 1 cancer types. Because this analysis shows association rather than direction, both CHST9-to-partner and partner-to-CHST9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CHST9 versus TRPC1 in LSCC, with a Pearson correlation of -0.32.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CHST9→partner) and Y-score (partner→CHST9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	TRPC1 →	-0.904	-0.899	<.001	<.001	3	2
LUAD	TRIM17 →	+1.024	+0.881	<.001	<.001	3	2
LUAD	CA8 →	+1.021	+0.586	.001	.004	3	2
GBM	NKAIN3 →	+1.384	+0.922	.001	<.001	3	2
LSCC	IRAK4 →	-0.403	-0.875	.004	.004	3	2
LSCC	ZNF805 →	-0.442	-0.768	.005	.008	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,772 associations by consensus.

CHST9 vs TRPC1 — LSCC

Explore this scatter interactively →