CHST7

Across TCGA patient cohorts, CHST7 protein abundance is significantly associated with the RNA expression of many other genes, with 5,617 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CHST7-associated genes across cancer lineages are NPM3, HPS5, and LINC02042. Each is linked with CHST7 in more than 1 cancer types. Because this analysis shows association rather than direction, both CHST7-to-partner and partner-to-CHST7 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CHST7 versus NPM3 in CCRCC, with a Pearson correlation of 0.72.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CHST7→partner) and Y-score (partner→CHST7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CCRCC	NPM3 →	+1.283	+3.503	.006	.005	3	2
LSCC	HPS5 →	+0.320	+0.685	.005	<.001	3	2
LSCC	LINC02042 →	+1.089	+0.544	.001	<.001	3	2
LSCC	LINC00698 →	+0.369	+0.516	<.001	<.001	3	2
LSCC	C19orf53 →	+0.376	+0.771	.002	<.001	3	2
LSCC	PDCD5 →	+0.584	+0.595	<.001	.002	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,617 associations by consensus.

CHST7 vs NPM3 — CCRCC

Explore this scatter interactively →