CHST3

Across TCGA patient cohorts, CHST3 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,221 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible CHST3-associated proteins across cancer lineages are BICD2, CRTAP, and HID1. Each is linked with CHST3 in more than 4 cancer types. Because this analysis shows association rather than direction, both CHST3-to-partner and partner-to-CHST3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CHST3 versus BICD2 in LSCC, with a Pearson correlation of 0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CHST3→partner) and Y-score (partner→CHST3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	BICD2 →	+0.415	+0.599	<.001	<.001	3	5
PDAC	CRTAP →	+0.510	+0.688	<.001	<.001	3	5
BRCA	HID1 →	-0.893	-1.158	<.001	<.001	3	5
BRCA	LRBA →	-0.516	-0.933	<.001	<.001	3	5
PDAC	MMP14 →	+0.524	+0.690	<.001	<.001	3	5
BRCA	TUBB6 →	+0.516	+0.995	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,221 associations by consensus.

CHST3 vs BICD2 — LSCC

Explore this scatter interactively →