CHST15

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CHST15 protein abundance is significantly associated with the RNA expression of many other genes, with 5,743 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CHST15-associated genes across cancer lineages are COL5A1, BGN, and IGSF21. Each is linked with CHST15 in more than 3 cancer types. Because this analysis shows association rather than direction, both CHST15-to-partner and partner-to-CHST15 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CHST15 versus COL5A1 in BRCA, with a Pearson correlation of 0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CHST15→partner) and Y-score (partner→CHST15) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACOL5A1 →+1.427+0.648<.001<.00134
UCECBGN →+1.256+1.191<.001.00234
BRCAIGSF21 →+1.260+0.562.001.00134
GBMPABPC5 →+0.957+0.390.003.00334
UCECFGF1 →+1.715+1.238.001.00933
BRCASTMN1 →-1.053-0.535<.001.00933
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,743 associations by consensus.

CHST15 vs COL5A1 — BRCA

Per-sample scatter of CHST15 vs COL5A1 in BRCA (Pearson r = 0.38).

Explore this scatter interactively →

Exploration