CHST11

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CHST11 RNA expression is significantly associated with the protein abundance of many other proteins, with 21,431 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CHST11-associated proteins across cancer lineages are CRTAP, ELMO2, and P3H1. Each is linked with CHST11 in more than 8 cancer types. Because this analysis shows association rather than direction, both CHST11-to-partner and partner-to-CHST11 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CHST11 versus CRTAP in LSCC, with a Pearson correlation of 0.48.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CHST11→partner) and Y-score (partner→CHST11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCCRTAP →+0.584+0.811<.001<.00139
LSCCELMO2 →+0.346+0.793<.001<.00139
BRCAP3H1 →+0.520+0.773<.001<.00139
UCECTBC1D2B →+0.407+0.888<.001<.00139
LUADRUNX1_T14 →+0.647+0.730<.001<.00138
OVC1R →+0.545+0.692<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 21,431 associations by consensus.

CHST11 vs CRTAP — LSCC

Per-sample scatter of CHST11 vs CRTAP in LSCC (Pearson r = 0.48).

Explore this scatter interactively →

Exploration