CHST1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CHST1 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,054 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CHST1-associated proteins across cancer lineages are CLSTN1, MAP1B_S1779, and OLFML3. Each is linked with CHST1 in more than 5 cancer types. Because this analysis shows association rather than direction, both CHST1-to-partner and partner-to-CHST1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CHST1 versus CLSTN1 in BRCA, with a Pearson correlation of 0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CHST1→partner) and Y-score (partner→CHST1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACLSTN1 →+0.677+1.477<.001<.00136
LSCCMAP1B_S1779 →+1.223+0.756.001<.00136
CCRCCOLFML3 →+0.643+0.855<.001<.00135
CCRCCC1QTNF5 →+0.669+0.747<.001<.00135
COADCOL3A1 →+1.034+0.710<.001<.00135
LUADCOL5A2 →+0.606+0.604<.001.00635
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,054 associations by consensus.

CHST1 vs CLSTN1 — BRCA

Per-sample scatter of CHST1 vs CLSTN1 in BRCA (Pearson r = 0.37).

Explore this scatter interactively →

Exploration