CHST1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CHST1 mutation is significantly associated with the total protein of many other genes, with 56 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CHST1-associated genes across cancer lineages are Caspase-7-cleavedD198, 4E-BP1, and MSH2. Each is linked with CHST1 in more than 2 cancer types. Because this analysis shows association rather than direction, both CHST1-to-partner and partner-to-CHST1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by CHST1-low versus CHST1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CHST1→partner) and Y-score (partner→CHST1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCaspase-7-cleavedD198 →+0.664+1.604.001.02133
UCEC4E-BP1 →+0.289+3.584.001.00232
COADMSH2 →-0.263-2.974.006.03532
COADC-Raf →+0.158+2.356.013.01732
UCECEGFR_pY1068 →-0.289-3.000<.001<.00132
UCECEGFR →-0.162-1.700.003.04232
Each partner links to its Q-omics profile. Showing the 6 strongest of 56 associations by consensus.

Caspase-7-cleavedD198 by CHST1 expression — UCEC

Box plot of Caspase-7-cleavedD198 in CHST1-low vs CHST1-high samples in UCEC.

Explore this box plot interactively →

Exploration