CHPF2

Across TCGA cell cohorts, CHPF2 RNA expression is significantly associated with the RNA expression of many other genes, with 11,124 significant associations in total. CNS shows the largest number of these associations.

The most reproducible CHPF2-associated genes across cancer lineages are CALU, FASTK, and TMEM127. Each is linked with CHPF2 in more than 15 cancer types. Because this analysis shows association rather than direction, both CHPF2-to-partner and partner-to-CHPF2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CHPF2 versus CALU in BREAST, with a Pearson correlation of 0.59.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CHPF2→partner) and Y-score (partner→CHPF2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BREAST	CALU →	+1.709	+1.327	<.001	<.001	3	16
CNS	FASTK →	+0.924	+1.263	<.001	<.001	3	16
OESOPHAGUS	TMEM127 →	+0.944	+0.915	<.001	.001	3	15
BLOOD_Myeloma	SLC4A2 →	+1.350	+1.228	.001	.001	2	16
BLOOD_Myeloma	SDF4 →	+1.181	+1.316	<.001	<.001	3	15
BREAST	TGOLN2 →	+1.418	+1.253	<.001	<.001	3	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,124 associations by consensus.

CHPF2 vs CALU — BREAST

Explore this scatter interactively →