CHPF2

Across TCGA cell cohorts, CHPF2 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,314 significant associations in total. CNS shows the largest number of these associations.

The most reproducible CHPF2-associated GO terms across cancer lineages are Protein localization to endoplasmic reticulum, Lysosomal transport, and Protein localization to vacuole. Each is linked with CHPF2 in more than 14 cancer types. Because this analysis shows association rather than direction, both CHPF2-to-partner and partner-to-CHPF2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein localization to endoplasmic reticulum grouped by CHPF2-low versus CHPF2-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CHPF2→partner) and Y-score (partner→CHPF2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BONE	Protein localization to endoplasmic reticulum →	+0.142	+1.558	<.001	<.001	3	15
OESOPHAGUS	Lysosomal transport →	+0.057	+1.010	.002	.001	3	14
STOMACH	Protein localization to vacuole →	+0.100	+1.159	.002	<.001	3	14
BONE	Negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway →	+0.197	+1.228	.001	.009	2	15
BONE	Endocytic recycling →	+0.077	+1.441	.003	.003	3	14
BONE	Regulation of cellular response to transforming growth factor beta stimulus →	+0.079	+1.628	.002	<.001	3	14

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,314 associations by consensus.

Protein localization to endoplasmic reticulum by CHPF2 expression — BONE

Explore this box plot interactively →