CHN2

Across TCGA patient cohorts, CHN2 protein abundance is significantly associated with the RNA expression of many other genes, with 5,485 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CHN2-associated genes across cancer lineages are GDPD3, MYH14, and CDR2L. Each is linked with CHN2 in more than 1 cancer types. Because this analysis shows association rather than direction, both CHN2-to-partner and partner-to-CHN2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CHN2 versus GDPD3 in UCEC, with a Pearson correlation of -0.77.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CHN2→partner) and Y-score (partner→CHN2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	GDPD3 →	-0.704	-0.961	.001	.004	3	1
UCEC	MYH14 →	-1.857	-0.794	.003	.003	3	1
UCEC	CDR2L →	-1.165	-0.782	<.001	.005	3	1
UCEC	ATP10B →	-1.664	-0.897	<.001	<.001	3	1
UCEC	PCDHB8 →	-1.398	-1.001	.005	.001	3	1
UCEC	CDK2 →	-0.555	-0.828	.002	.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,485 associations by consensus.

CHN2 vs GDPD3 — UCEC

Explore this scatter interactively →