CHKA

Across TCGA patient cohorts, CHKA mutation is significantly associated with the total protein of many other genes, with 34 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CHKA-associated genes across cancer lineages are ATM, Shc_pY317, and EGFR_pY1068. Each is linked with CHKA in more than 2 cancer types. Because this analysis shows association rather than direction, both CHKA-to-partner and partner-to-CHKA results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATM grouped by CHKA-low versus CHKA-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CHKA→partner) and Y-score (partner→CHKA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	ATM →	-0.600	-2.584	<.001	.001	3	3
UCEC	Shc_pY317 →	-0.171	-2.584	.003	.010	3	2
UCEC	EGFR_pY1068 →	-0.282	-3.807	.003	<.001	3	1
UCEC	A-Raf_pS299 →	-0.116	-3.584	.011	.002	3	1
UCEC	ERK2 →	+0.210	+2.087	.004	.005	3	1
UCEC	GAPDH →	+0.428	+2.999	.038	.035	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 34 associations by consensus.

ATM by CHKA expression — UCEC

Explore this box plot interactively →